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Basic approaches to data management for administration of biological collections

Abstract

The article analyses the main principles of and approaches to software and hardware solutions and platforms that could be used in the development of data management systems for biological collections. The authors summarise the key requirements for functional capabilities of the software which could be used to support biological resources databases and which is a prerequisite for maintaining a highly organized biological collection. The article sums up the main approaches to restricting access to information on biological collections as required by the patent procedure and biological safety principles. The authors identified specific aspects of developing information support systems for public biological collections.

About the Authors

D. S. Davydov
Scientific Centre for Expert Evaluation of Medicinal Products
Russian Federation
Head of the Laboratory of Bacteriophages and Normal Flora Preparations with the Collection of Microorganisms of the Testing Centre for Evaluation of Medicinal Immunobiological Products’ Quality. Candidate of Biological Sciences


K. A. Koshechkin
Scientific Centre for Expert Evaluation of Medicinal Products
Russian Federation
Head of Informatization Division. Candidate of Biological Sciences


A. A. Movsesyants
Scientific Centre for Expert Evaluation of Medicinal Products
Russian Federation
Head of the Testing Centre for Evaluation of Medicinal Immunobiological Products’ Quality. Doctor of Medical Sciences, professor


References

1. VP-P8-2322. The comprehensive program of development of biotechnologies in the Russian Federation until 2020 (approved by the Government of the Russian Federation on April 24, 2012 ¹ 1853p-P8) (in Russian).

2. Onishenko GG, Kutyrev VV, Toporkov AV, Ossin AV. Current state of collection activity relative to the use of infectious agents of I–II pathogenicity groups. Problems of Particularly Dangerous Infections 2010; 1(103): 5–10 (in Russian).

3. Consolidated Catalogue of Microbial Cultures Held in Russian Non-medical Collections. 2002. Available from: https://goo.gl/ kdZmRD (in Russian).

4. All-Russian Collection of Microorganisms — VKM. Russian Academy of Sciences. G. K. Skryabin Institute of Biochemistry and Physiology of Microorganisms. Available from: http://www.vkm.ru.

5. All-Russian catalogue of culture collections. A. N. Severtsov’ Institute of ecology and evolution Russian academy of sciences. Available from: http://www.sevin.ru/collection/microcoll/consolidated.html (in Russian).

6. Altschul SF, Gish W, Miller W, Myers EW, Lipman DJ. Basic local alignment search tool. J Mol Biol. 1990; 215(3): 403–10.

7. Saitou N, Nei M. The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol Biol Evol. 1987; 4(4): 406–25.


Review

For citations:


Davydov D.S., Koshechkin K.A., Movsesyants A.A. Basic approaches to data management for administration of biological collections. BIOpreparations. Prevention, Diagnosis, Treatment. 2017;17(4):216-221. (In Russ.)

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ISSN 2221-996X (Print)
ISSN 2619-1156 (Online)